Denticeps_clupeoides_GCA_900700375.1

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Highlighted species

All species

Search Denticeps clupeoides

View karyotype

Example region

Genome assembly: fDenClu1.1 (GCA_900700375.1)

Download DNA sequence (FASTA)

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Other assemblies

Denticeps clupeoides (Denticle herring) - GCA_900700375.2

Example gene

Example transcript

Gene annotation

What can I find? Protein-coding and non-coding genes, splice variants, cDNA and protein sequences, non-coding RNAs.

Download FASTA, GTF or GFF3 files for genes, cDNAs, ncRNA, proteins

Statistics

Summary

Assembly	fDenClu1.1, INSDC Assembly GCA_900700375.1, Mar 2019
Base Pairs	567,401,054
Golden Path Length	567,401,054
Annotation provider	Ensembl
Annotation method	Ensembl Genebuild
Genebuild started	May 2019
Genebuild released	Sep 2019
Genebuild last updated/patched	Dec 2019
Database version	110.1

Gene counts

Gene/transcipt that contains an open reading frame (ORF).Coding genes	24,142
Non coding genes	7,744
Small non coding genes	6,163
Long non coding genes	1,548
Misc non coding genes	33
A gene that has homology to known protein-coding genes but contain a frameshift and/or stop codon(s) which disrupts the ORF. Thought to have arisen through duplication followed by loss of function.Pseudogenes	535
A transcript is the operational unit of a gene. In a genomic context, transcripts consist of one or more exons, with adjoining exons being separated by introns. The exons/introns are transcribed and then the introns spliced out. Transcripts may or may not encode a proteinGene transcripts	72,751

Other

Genscan gene predictions

38,171

Personal Data