Marmota_monax_GCA_901343595.1

We have frozen Ensembl Rapid Release

All Rapid Release data, including release 65, has been uploaded into the new Ensembl Beta site.

New genome data that would previously have been released on Rapid Release will only be released to the new Ensembl Beta site.
We will no longer release data to the Ensembl Rapid Release browser and Rapid Release FTP site.

Go to beta.ensembl.org now

If you feel that this change will have a significant impact on your analyses, please get in touch

More ▼

Highlighted species

All species

Search Marmota monax

Example region

Genome assembly: MONAX5 (GCA_901343595.1)

Download DNA sequence (FASTA)

Display your data in Ensembl

Other assemblies

Marmota monax (Woodchuck) - GCA_021218885.2

Example gene

Example transcript

Gene annotation

What can I find? Protein-coding and non-coding genes, splice variants, cDNA and protein sequences, non-coding RNAs.

Download FASTA, GTF or GFF3 files for genes, cDNAs, ncRNA, proteins

Statistics

Summary

Assembly	MONAX5, INSDC Assembly GCA_901343595.1, Sep 2019
Base Pairs	2,626,060,708
Golden Path Length	2,626,060,708
Annotation provider	Ensembl
Annotation method	Ensembl Genebuild
Genebuild started	Aug 2020
Genebuild released	Feb 2021
Genebuild last updated/patched	Sep 2020
Database version	110.1

Gene counts

Gene/transcipt that contains an open reading frame (ORF).Coding genes	23,084
Non coding genes	3,145
Small non coding genes	2,343
Long non coding genes	789
Misc non coding genes	13
A gene that has homology to known protein-coding genes but contain a frameshift and/or stop codon(s) which disrupts the ORF. Thought to have arisen through duplication followed by loss of function.Pseudogenes	747
A transcript is the operational unit of a gene. In a genomic context, transcripts consist of one or more exons, with adjoining exons being separated by introns. The exons/introns are transcribed and then the introns spliced out. Transcripts may or may not encode a proteinGene transcripts	45,342

Other

Genscan gene predictions

82,424

Personal Data