Oryzias_latipes_GCA_947078775.1

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Search Oryzias latipes

Example region

Genome assembly: MIKK_134-1 (GCA_947078775.1)

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Example gene

Example transcript

Gene annotation

What can I find? Protein-coding and non-coding genes, splice variants, cDNA and protein sequences, non-coding RNAs.

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Statistics

Summary

Assembly	MIKK_134-1, INSDC Assembly GCA_947078775.1, Oct 2022
Base Pairs	764,795,009
Golden Path Length	764,795,009
Annotation provider	Ensembl
Annotation method	Ensembl Genebuild
Genebuild started	Feb 2023
Genebuild released
Genebuild last updated/patched	Mar 2023
Database version	110.1

Gene counts

Gene/transcipt that contains an open reading frame (ORF).Coding genes	22,862
Non coding genes	6,618
Small non coding genes	542
Long non coding genes	6,038
Misc non coding genes	38
A gene that has homology to known protein-coding genes but contain a frameshift and/or stop codon(s) which disrupts the ORF. Thought to have arisen through duplication followed by loss of function.Pseudogenes	201
A transcript is the operational unit of a gene. In a genomic context, transcripts consist of one or more exons, with adjoining exons being separated by introns. The exons/introns are transcribed and then the introns spliced out. Transcripts may or may not encode a proteinGene transcripts	80,196

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