Alligator_mississippiensis_GCA_030867095.1

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Example region

Genome assembly: rAllMis1 (GCA_030867095.1)

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Example transcript

Gene annotation

What can I find? Protein-coding and non-coding genes, splice variants, cDNA and protein sequences, non-coding RNAs.

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Statistics

Summary

Assembly	rAllMis1, INSDC Assembly GCA_030867095.1, Aug 2023
Base Pairs	2,346,795,873
Golden Path Length	2,346,795,873
Annotation provider	Ensembl
Annotation method	Ensembl Genebuild
Genebuild started	Feb 2024
Genebuild released
Genebuild last updated/patched	Mar 2024
Database version	110.1

Gene counts

Gene/transcipt that contains an open reading frame (ORF).Coding genes	18,451
Non coding genes	7,597
Small non coding genes	2,540
Long non coding genes	5,026
Misc non coding genes	31
A gene that has homology to known protein-coding genes but contain a frameshift and/or stop codon(s) which disrupts the ORF. Thought to have arisen through duplication followed by loss of function.Pseudogenes	49
A transcript is the operational unit of a gene. In a genomic context, transcripts consist of one or more exons, with adjoining exons being separated by introns. The exons/introns are transcribed and then the introns spliced out. Transcripts may or may not encode a proteinGene transcripts	49,456

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