Ictidomys_tridecemlineatus_GCA_016881025.1

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Genome assembly: HiC_Itri_2 (GCA_016881025.1)

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Gene annotation

What can I find? Protein-coding and non-coding genes, splice variants, cDNA and protein sequences, non-coding RNAs.

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Statistics

Summary

Assembly	HiC_Itri_2, INSDC Assembly GCA_016881025.1, Feb 2021
Base Pairs	2,478,965,571
Golden Path Length	2,478,965,571
Annotation provider	Ensembl
Annotation method	Ensembl Genebuild
Genebuild started	Apr 2023
Genebuild released
Genebuild last updated/patched	Jul 2023
Database version	110.1

Gene counts

Gene/transcipt that contains an open reading frame (ORF).Coding genes	20,516
Non coding genes	1,975
Small non coding genes	1,961
Long non coding genes	4
Misc non coding genes	10
A gene that has homology to known protein-coding genes but contain a frameshift and/or stop codon(s) which disrupts the ORF. Thought to have arisen through duplication followed by loss of function.Pseudogenes	475
A transcript is the operational unit of a gene. In a genomic context, transcripts consist of one or more exons, with adjoining exons being separated by introns. The exons/introns are transcribed and then the introns spliced out. Transcripts may or may not encode a proteinGene transcripts	30,900

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