Zalophus_californianus_GCA_009762305.1

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Highlighted species

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Search Zalophus californianus

View karyotype

Example region

Genome assembly: mZalCal1.pri (GCA_009762305.1)

Download DNA sequence (FASTA)

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Other assemblies

Zalophus californianus (California sea lion) - GCA_009762305.2

Example gene

Example transcript

Gene annotation

What can I find? Protein-coding and non-coding genes, splice variants, cDNA and protein sequences, non-coding RNAs.

Download FASTA, GTF or GFF3 files for genes, cDNAs, ncRNA, proteins

Statistics

Summary

Assembly	mZalCal1.pri, INSDC Assembly GCA_009762305.1, Dec 2019
Base Pairs	2,408,641,788
Golden Path Length	2,408,641,788
Assembly provider	Vertebrate Genomes Project
Annotation provider	Ensembl
Annotation method	Ensembl Genebuild
Genebuild started	Jan 2020
Genebuild released	May 2020
Genebuild last updated/patched	Jan 2020
Database version	110.1

Gene counts

Gene/transcipt that contains an open reading frame (ORF).Coding genes	20,818
Non coding genes	3,504
Small non coding genes	2,705
Long non coding genes	764
Misc non coding genes	35
A gene that has homology to known protein-coding genes but contain a frameshift and/or stop codon(s) which disrupts the ORF. Thought to have arisen through duplication followed by loss of function.Pseudogenes	926
A transcript is the operational unit of a gene. In a genomic context, transcripts consist of one or more exons, with adjoining exons being separated by introns. The exons/introns are transcribed and then the introns spliced out. Transcripts may or may not encode a proteinGene transcripts	45,454

Other

Genscan gene predictions

47,871

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