Asterias_rubens_GCA_902459465.3rs

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Highlighted species

All species

Search Asterias rubens

View karyotype

Example region

Genome assembly: eAstRub1.3 (GCA_902459465.3)

Download DNA sequence (FASTA)

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Other assemblies

Asterias rubens (European starfish) - GCA_902459465.3

Example gene

Example transcript

Gene annotation

What can I find? Protein-coding and non-coding genes, splice variants, cDNA and protein sequences, non-coding RNAs.

Download FASTA, GTF or GFF3 files for genes, cDNAs, ncRNA, proteins

Statistics

Summary

Assembly	eAstRub1.3, INSDC Assembly GCA_902459465.3,
Base Pairs	417,601,740
Golden Path Length	417,601,740
Assembly provider	Wellcome Sanger Institute
Annotation provider	NCBI
Annotation method	Import
Genebuild started	Mar 2022
Genebuild released	Mar 2022
Genebuild last updated/patched	Mar 2022
Database version	110.1

Gene counts

Gene/transcipt that contains an open reading frame (ORF).Coding genes	16,079
Non coding genes	3,498
Small non coding genes	2,239
Long non coding genes	1,259
A gene that has homology to known protein-coding genes but contain a frameshift and/or stop codon(s) which disrupts the ORF. Thought to have arisen through duplication followed by loss of function.Pseudogenes	361
A transcript is the operational unit of a gene. In a genomic context, transcripts consist of one or more exons, with adjoining exons being separated by introns. The exons/introns are transcribed and then the introns spliced out. Transcripts may or may not encode a proteinGene transcripts	28,599

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