Coregonus_clupeaformis_GCA_020615455.1

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Highlighted species

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Search Coregonus clupeaformis

View karyotype

Example region

Genome assembly: ASM2061545v1 (GCA_020615455.1)

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Other assemblies

Coregonus clupeaformis (Lake whitefish) - GCA_018398675.1

Example gene

Example transcript

Gene annotation

What can I find? Protein-coding and non-coding genes, splice variants, cDNA and protein sequences, non-coding RNAs.

Download FASTA, GTF or GFF3 files for genes, cDNAs, ncRNA, proteins

Statistics

Summary

Assembly	ASM2061545v1, INSDC Assembly GCA_020615455.1, Nov 2021
Base Pairs	2,753,287,365
Golden Path Length	2,753,287,365
Annotation provider	Ensembl
Annotation method	Ensembl Genebuild
Genebuild started	Mar 2024
Genebuild released
Genebuild last updated/patched	Mar 2024
Database version	110.1

Gene counts

Gene/transcipt that contains an open reading frame (ORF).Coding genes	45,064
Non coding genes	7,844
Small non coding genes	3,423
Long non coding genes	4,330
Misc non coding genes	91
A gene that has homology to known protein-coding genes but contain a frameshift and/or stop codon(s) which disrupts the ORF. Thought to have arisen through duplication followed by loss of function.Pseudogenes	178
A transcript is the operational unit of a gene. In a genomic context, transcripts consist of one or more exons, with adjoining exons being separated by introns. The exons/introns are transcribed and then the introns spliced out. Transcripts may or may not encode a proteinGene transcripts	132,512

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